unintentional loss of essential ions and amino acids11,12. The insect excretory system is under complex control, which may include direct innervation and regulation by neurotransmitters such as proctolin, as observed in the hindgut of many insects13,14. The excretory system in insects is also unde...
Sequence comparison between Nipponbare and 93-11 indicated thatCOG1of Nipponbare is a 1605-bp open reading frame encoding 534 amino acids, butCOG1of 93-11 contain a 6,665-bp insertion at position +9 from the start codon, resulting in silence of this gene (Fig.3aand Fig.1e). Variation ...
1). The arrows indicate the start of the 5′ deleted ΔhASCT2 mRNAs and the nomenclature of the deleted mRNAs corresponds to the position of the amino acid encoded by the first codon in the sequence. The potential initiator codons are indicated by a line above the mRNA sequence. The ...
The crystal structure of 3CLpro in complex with the allosteric inhibitor AT7519 (RCSB-PDB ID 7AGA) (Günther et al., 2021) was processed by Spruce (Spruce 1.3.0.1) to enumerate possible alternate amino acid locations, build missing partial sidechains, cap chain breaks, model missing loops, ...
(position 11,630,687) was located in the intron of Rc01G001604 which encodes a protein of 132 amino acids with unknown function. While genome region SZ3 did not overlap a putative domestication sweep, it does overlap with QTLs for SL, SW, ST, and SSW (Fig.5e and Additional file2: ...
ORF3 encodes the minor structural protein VP2 which could serve as a VP1 helper protein and stabilization of the viral capsid. Norovirus is globally endemic, with symptoms including stomach cramps, diarrhea, and vomiting that may last up to four days [4]. Severe norovirus disease typically ...
aLRT: approximate likelihood ratio test; dN: the number of nonsynonymous codon changes per nonsynonymous site; dS: the number of synonymous codon changes per synonymous site; EST: expressed sequence tag; GPCR: G protein coupled receptor; HMM: hidden Markov model; My: million years; NCBI: Nation...
In the case of ABAYE1887, a FUR box with a low p-value can be found less than 200 bp upstream of the start codon using the ATCC 17978 optimized FUR motif. Moreover, qRT-PCR analysis demonstrated that growth of A. baumannii AYE under iron limiting conditions resulted in approximately 164...
caulinodans gene; indication of the gene function based on homology; functional classification of genes according to Riley [26]; position of start codon or stop codon of a gene on the plus or minus strand, respectively; position of stop codon or start codon of a gene on the plus or minus...
The bla gene on the pETDuet-1 plasmid encodes a secretory β-lactamase which catalyzes the hydrolysis of the ampicillin, leading to loss of its antibacterial activity [38]. Therefore, when adding IPTG to induce protein expression, additional 100 μg/mL ampicillin was supplemented to prevent ...