11、phylogenydescription 系统发育描述 12、phylogenydefinition in biology 生物学中的系统发育定义 13、phylogenyof fungi 真菌系统发育 14、didelphidaephylogeny蚤科系统发育 15、phylogenytree maker 系统发育树生成器 16、phylogenydefinition 系统发育定义 17、phylogenymaker 系统发育标记...
The maximum likelihood (ML) phylogenetic tree comprising a total of 54 taxa was rooted with two closely related outgroup taxa47i.e.Tradescantia pallidaandWeldenia candida(Fig.1). All ingroup members representing six different subfamilies of the family Asparagaceae fell into three major clades (I,...
due to the discrepancies with resulting SWLHs, a heurist was implemented (Additional file1: Section 2). This file is then served as input toCONSEL(i.e., tomakermt). Likewise,TreeCmpinput requires a single file containing all Newick formatted topologies. At this point,TreeCmpis ready for co...
Stout camphor tree genome fills gaps in understanding of flowering plant genome evolution Shu-Miaw Chaw Yu-Ching Liu Isheng J. Tsai Nature Plants Article Open Access 09 Jan 2019 Nuclear genomes of two magnoliids Douglas E. Soltis Pamela S. Soltis Nature Plants News & Views 09 Jan 20...
In conclusion, as exemplified by the different analyses run herein, a topology as shown by the preferred tree of ref.31(Fig. 7b; which is reminiscent of the results of the analysis of ref.48: Fig. 2, except that thalattosaurs and ichthyoptygians + hupehsuchians do not form a si...
Table 3 Tree topology testing based on the data set of 154taxa_PCGDegenRNA. Full size table Conclusion In summary, the results obtained in the phylogenetic analyses of the mitogenome data are largely consistent with recently dominant hypotheses of Polyneoptera phylogeny, such as a monophyletic Or...
9B). The overall pattern of morphospace occupation matches interpretations of opportunistic phylogenetic diffusion well, with multiple innovations and acquisitions of convergent morphologies in ecological expansion of crabs during the Mesozoic marine revolution (e.g.,Vermeij, 1977; Klompmaker et al., ...
For the former case, we have integrated the CON- SEL [87] package (which consists of three programs exe- cuted in the following order: (1) makermt, (2) consel and (3) catpv). For the latter we have integrated the TreeCmp [88] package. From both approaches three reports are ...
Then, the phylogenetic tree was reconstructed using the R function ‘phylo.maker’ using the mega-tree ‘GBOTB.extended.tre’, which is the combination of updated phylogenetic trees of previous studies [67,68]. 4.4. Data Analysis All analyses were run in R version 4.3.1 [69] (see File ...